[CoSim] update CoSimIO to v 4.3

applications/CoSimulationApplication/custom_external_libraries/CoSimIO/CMakeLists.txt

@@ -42,7 +42,7 @@ message("    CO_SIM_IO_BUILD_MPI:       " ${CO_SIM_IO_BUILD_MPI})
 message("    CO_SIM_IO_BUILD_TESTING:   " ${CO_SIM_IO_BUILD_TESTING})
 message("    CO_SIM_IO_BUILD_C:         " ${CO_SIM_IO_BUILD_C})
 message("    CO_SIM_IO_BUILD_PYTHON:    " ${CO_SIM_IO_BUILD_PYTHON})
-# message("    CO_SIM_IO_BUILD_FORTRAN:   " ${CO_SIM_IO_BUILD_FORTRAN})
+message("    CO_SIM_IO_BUILD_FORTRAN:   " ${CO_SIM_IO_BUILD_FORTRAN})
 message("    CO_SIM_IO_STRICT_COMPILER: " ${CO_SIM_IO_STRICT_COMPILER})
 message("")
 
@@ -124,8 +124,7 @@ message("CMAKE_CXX_FLAGS:" ${CMAKE_CXX_FLAGS})
 message("CMAKE_C_FLAGS:" ${CMAKE_C_FLAGS})
 
 if (${CMAKE_SYSTEM_NAME} MATCHES "Darwin")
-    # to suppress warning "MACOSX_RPATH is not specified for the following targets"
-    set(CMAKE_MACOSX_RPATH 0)
+    cmake_policy(SET CMP0042 NEW)
 endif()
 
 # clean the bin directory
@@ -180,9 +179,14 @@ if (CO_SIM_IO_BUILD_PYTHON)
 endif()
 
 if (CO_SIM_IO_BUILD_FORTRAN)
-    # TODO since fortran relies on C, a check is needed
-    message( FATAL_ERROR "The CoSimIO is currently not working for Fortran")
-    add_subdirectory(co_sim_io/fortran)
+    if (NOT CO_SIM_IO_BUILD_C)
+        message(FATAL_ERROR "Fortran requires the C interface!")
+    endif()
+    include(CMakeAddFortranSubdirectory)
+    cmake_add_fortran_subdirectory(
+        co_sim_io/fortran
+        NO_EXTERNAL_INSTALL
+    )
 endif()
 
 if (CO_SIM_IO_BUILD_TESTING)

applications/CoSimulationApplication/custom_external_libraries/CoSimIO/README.md

@@ -7,7 +7,7 @@
 Kratos CoSimulationApplication
 ~~~
 
-[![CI](https://github.com/KratosMultiphysics/CoSimIO/actions/workflows/ci.yml/badge.svg?event=schedule)](https://github.com/KratosMultiphysics/CoSimIO/actions/workflows/ci.yml)
+<!--- [![CI](https://github.com/KratosMultiphysics/CoSimIO/actions/workflows/ci.yml/badge.svg?event=schedule)](https://github.com/KratosMultiphysics/CoSimIO/actions/workflows/ci.yml)-->
 # CoSimIO
 
 The _CoSimIO_ is a small library for interprocess communication in CoSimulation contexts. It is designed for exchanging data between different solvers or other software-tools. For performing coupled simulations it is used in combination with the [_CoSimulationApplication_](https://github.com/KratosMultiphysics/Kratos/tree/master/applications/CoSimulationApplication).\

applications/CoSimulationApplication/custom_external_libraries/CoSimIO/co_sim_io/includes/communication/communication.hpp

@@ -178,7 +178,7 @@ class CO_SIM_IO_API Communication
     Info GetMyInfo() const;
     Info GetPartnerInfo() const {return mPartnerInfo;};
 
-    fs::path GetTempFileName(
+    fs::path GetTmpFileName(
         const fs::path& rPath,
         const bool UseAuxFileForFileAvailability=true) const;
 

applications/CoSimulationApplication/custom_external_libraries/CoSimIO/co_sim_io/includes/communication/local_socket_communication.hpp

@@ -14,7 +14,6 @@
 #define CO_SIM_IO_LOCAL_SOCKET_COMMUNICATION_INCLUDED
 
 // System includes
-#include <thread>
 
 // Project includes
 #include "includes/communication/base_socket_communication.hpp"

applications/CoSimulationApplication/custom_external_libraries/CoSimIO/co_sim_io/includes/communication/socket_communication.hpp

@@ -14,7 +14,6 @@
 #define CO_SIM_IO_SOCKET_COMMUNICATION_INCLUDED
 
 // System includes
-#include <thread>
 
 // Project includes
 #include "includes/communication/base_socket_communication.hpp"

applications/CoSimulationApplication/custom_external_libraries/CoSimIO/co_sim_io/includes/filesystem_inc.hpp

@@ -13,22 +13,7 @@
 #ifndef CO_SIM_IO_FILESYSTEM_INC_INCLUDED
 #define CO_SIM_IO_FILESYSTEM_INC_INCLUDED
 
-/* std::filesystem is part of C++17
-While we use C++11, the alternative implementation from
-"https://github.com/gulrak/filesystem" is used
-*/
-
-#ifndef WIN32_LEAN_AND_MEAN
-    #define WIN32_LEAN_AND_MEAN
-#endif
-#ifndef NOMINMAX
-    #define NOMINMAX
-#endif
-#include "ghc/filesystem.hpp"
-namespace fs = ghc::filesystem;
-
-// use this once moving to C++17
-// #include <filesystem>
-// namespace fs = std::filesystem;
+#include <filesystem>
+namespace fs = std::filesystem;
 
 #endif // CO_SIM_IO_FILESYSTEM_INC_INCLUDED

applications/CoSimulationApplication/custom_external_libraries/CoSimIO/co_sim_io/sources/code_location.cpp

@@ -14,15 +14,35 @@
 
 // Project includes
 #include "includes/code_location.hpp"
-#include "includes/filesystem_inc.hpp"
 
 namespace CoSimIO {
 namespace Internals {
 
 std::string CodeLocation::GetCleanFileName() const
 {
-    return fs::canonical(fs::path(GetFileName())).lexically_relative(fs::absolute(".")).string();
+    std::string clean_file_name(GetFileName());
+
+    // Replace all backslashes with forward slashes
+    std::size_t start_position = 0;
+    const std::string from_string = "\\";
+    const std::string to_string = "/";
+    while ((start_position = clean_file_name.find(from_string, start_position)) != std::string::npos) {
+        clean_file_name.replace(start_position, from_string.length(), to_string);
+        start_position += to_string.length();
+    }
+
+    // Remove the path up to the co_sim_io root folder
+    std::size_t co_sim_io_root_position = clean_file_name.rfind("/co_sim_io/");
+    if (co_sim_io_root_position != std::string::npos) {
+        clean_file_name.erase(0, co_sim_io_root_position+1);
+        return clean_file_name;
+    }
+    if (co_sim_io_root_position != std::string::npos) {
+        clean_file_name.erase(0, co_sim_io_root_position + 1 );
+    }
+
+    return clean_file_name;
 }
 
-} // namespace Interals
+} // namespace Internals
 } // namespace CoSimIO

applications/CoSimulationApplication/custom_external_libraries/CoSimIO/co_sim_io/sources/communication/communication.cpp

@@ -276,7 +276,7 @@ void Communication::PostChecks(const Info& I_Info)
     CO_SIM_IO_ERROR_IF_NOT(I_Info.Has("memory_usage_ipc")) << "\"memory_usage_ipc\" must be specified!" << std::endl;
 }
 
-fs::path Communication::GetTempFileName(
+fs::path Communication::GetTmpFileName(
     const fs::path& rPath,
     const bool UseAuxFileForFileAvailability) const
 {
@@ -370,7 +370,7 @@ void Communication::MakeFileVisible(
     CO_SIM_IO_TRY
 
     if (!UseAuxFileForFileAvailability) {
-        const fs::path tmp_file_name = GetTempFileName(rPath, UseAuxFileForFileAvailability);
+        const fs::path tmp_file_name = GetTmpFileName(rPath, UseAuxFileForFileAvailability);
         AddFilePermissions(tmp_file_name);
         std::error_code ec;
         fs::rename(tmp_file_name, rPath, ec);
@@ -417,9 +417,9 @@ void Communication::SynchronizeAll(const std::string& rTag) const
 
         if (GetIsPrimaryConnection()) {
             std::ofstream sync_file;
-            sync_file.open(GetTempFileName(file_name_primary));
+            sync_file.open(GetTmpFileName(file_name_primary));
             sync_file.close();
-            CO_SIM_IO_ERROR_IF_NOT(fs::exists(GetTempFileName(file_name_primary))) << "Primary sync file " << file_name_primary << " could not be created!" << std::endl;
+            CO_SIM_IO_ERROR_IF_NOT(fs::exists(GetTmpFileName(file_name_primary))) << "Primary sync file " << file_name_primary << " could not be created!" << std::endl;
             MakeFileVisible(file_name_primary);
 
             WaitForPath(file_name_secondary, true, 2);
@@ -431,9 +431,9 @@ void Communication::SynchronizeAll(const std::string& rTag) const
             RemovePath(file_name_primary);
 
             std::ofstream sync_file;
-            sync_file.open(GetTempFileName(file_name_secondary));
+            sync_file.open(GetTmpFileName(file_name_secondary));
             sync_file.close();
-            CO_SIM_IO_ERROR_IF_NOT(fs::exists(GetTempFileName(file_name_secondary))) << "Secondary sync file " << file_name_secondary << " could not be created!" << std::endl;
+            CO_SIM_IO_ERROR_IF_NOT(fs::exists(GetTmpFileName(file_name_secondary))) << "Secondary sync file " << file_name_secondary << " could not be created!" << std::endl;
             MakeFileVisible(file_name_secondary);
 
             WaitUntilFileIsRemoved(file_name_secondary, 2);
@@ -485,7 +485,7 @@ void Communication::HandShake(const Info& I_Info)
             WaitUntilFileIsRemoved(rMyFileName,1); // in case of leftovers
 
             { // necessary as FileSerializer releases resources on destruction!
-                FileSerializer serializer_save(GetTempFileName(rMyFileName).string(), mSerializerTraceType);
+                FileSerializer serializer_save(GetTmpFileName(rMyFileName).string(), mSerializerTraceType);
                 serializer_save.save("info", GetMyInfo());
             }
 
@@ -524,7 +524,7 @@ void Communication::HandShake(const Info& I_Info)
 
         auto print_endianness = [](const bool IsBigEndian){return IsBigEndian ? "big endian" : "small endian";};
 
-        CO_SIM_IO_INFO_IF("CoSimIO", Utilities::IsBigEndian() != mPartnerInfo.Get<bool>("is_big_endian")) << "WARNING: Parnters have different endianness, check results carefully! It is recommended to use serialized ascii commuication.\n    My endianness:      " << print_endianness(Utilities::IsBigEndian()) << "\n    Partner endianness: " << print_endianness(mPartnerInfo.Get<bool>("is_big_endian")) << std::endl;
+        CO_SIM_IO_INFO_IF("CoSimIO", Utilities::IsBigEndian() != mPartnerInfo.Get<bool>("is_big_endian")) << "WARNING: Parnters have different endianness, check results carefully! It is recommended to use serialized ascii communication.\n    My endianness:      " << print_endianness(Utilities::IsBigEndian()) << "\n    Partner endianness: " << print_endianness(mPartnerInfo.Get<bool>("is_big_endian")) << std::endl;
 
         // more things can be done in derived class if necessary
         DerivedHandShake();

applications/CoSimulationApplication/custom_external_libraries/CoSimIO/co_sim_io/sources/communication/file_communication.cpp

@@ -215,9 +215,9 @@ Info FileCommunication::GenericSendWithFileSerializer(
     WaitUntilFileIsRemoved(file_name); // TODO maybe this can be queued somehow ... => then it would not block the sender
 
     const auto start_time(std::chrono::steady_clock::now());
-    SerializeToFile(GetTempFileName(file_name, mUseAuxFileForFileAvailability), rObj, GetSerializerTraceType());
+    SerializeToFile(GetTmpFileName(file_name, mUseAuxFileForFileAvailability), rObj, GetSerializerTraceType());
 
-    info.Set<std::size_t>("memory_usage_ipc", fs::file_size(GetTempFileName(file_name, mUseAuxFileForFileAvailability)));
+    info.Set<std::size_t>("memory_usage_ipc", fs::file_size(GetTmpFileName(file_name, mUseAuxFileForFileAvailability)));
 
     MakeFileVisible(file_name, mUseAuxFileForFileAvailability);
 
@@ -275,7 +275,7 @@ double FileCommunication::GenericSend(
 
     const auto start_time(std::chrono::steady_clock::now());
 
-    std::ofstream output_file(GetTempFileName(file_name, mUseAuxFileForFileAvailability), std::ios::out|std::ios::binary);
+    std::ofstream output_file(GetTmpFileName(file_name, mUseAuxFileForFileAvailability), std::ios::out|std::ios::binary);
     Utilities::CheckStream(output_file, file_name);
 
     output_file.write(reinterpret_cast<const char *>(&size), sizeof(std::size_t));

applications/CoSimulationApplication/custom_external_libraries/CoSimIO/co_sim_io/sources/version.cpp

@@ -20,11 +20,11 @@ int GetMajorVersion() {
 }
 
 int GetMinorVersion() {
-    return 2;
+    return 3;
 }
 
 std::string GetPatchVersion() {
-    return "0";
+    return "1";
 }
 
 } // namespace CoSimIO

applications/CoSimulationApplication/custom_external_libraries/CoSimIO/external_libraries/asio/COPYING

@@ -1,4 +1,4 @@
-Copyright (c) 2003-2021 Christopher M. Kohlhoff (chris at kohlhoff dot com)
+Copyright (c) 2003-2023 Christopher M. Kohlhoff (chris at kohlhoff dot com)
 
 Distributed under the Boost Software License, Version 1.0. (See accompanying
 file LICENSE_1_0.txt or copy at http://www.boost.org/LICENSE_1_0.txt)

applications/CoSimulationApplication/custom_external_libraries/CoSimIO/external_libraries/asio/README

@@ -1,4 +1,4 @@
-asio version 1.20.0
-Released Saturday, 16 October 2021.
+asio version 1.28.0
+Released Wednesday, 26 April 2023.
 
 See doc/index.html for API documentation and a tutorial.