Repositories list

• chonglab.github.io

  Public
  HTML

  •

  MIT License

  •0•0•0•0•Updated Nov 8, 2025Nov 8, 2025

• chonglab-site-fork

  Public
  ✨ Build a beautiful and simple website in literally minutes. Demo at https://beautifuljekyll.com

  HTML

  •

  MIT License

  •17k•0•0•0•Updated Aug 23, 2025Aug 23, 2025

• Inspector_protocol

  Public
  MIT License

  •4•8•0•0•Updated Nov 24, 2024Nov 24, 2024

• Inspector_protocal

  Public
  MIT License

  •4•0•0•0•Updated Sep 3, 2024Sep 3, 2024

• Inspector

  Public
  A tool for evaluate long-read de novo assembly results

  Python

  •

  MIT License

  •17•48•0•0•Updated Aug 28, 2024Aug 28, 2024

• FusionSeeker

  Public
  A gene fusion caller for long-read transcriptome sequencing data.

  Python

  •

  MIT License

  •5•0•0•0•Updated Apr 29, 2024Apr 29, 2024

• DeBreak

  Public
  Structural variant caller for real-time long-read sequencing data

  Python

  •

  MIT License

  •6•0•0•0•Updated Sep 2, 2022Sep 2, 2022

• B-assembler

  Public
  bacterial genome assembly

  Python

  •4•9•0•1•Updated Feb 7, 2021Feb 7, 2021

• ClipSV

  Public
  ClipSV: detecting structural variations by spliced alignment and local assembly

  Python

  •2•2•0•0•Updated Jan 12, 2021Jan 12, 2021

• MRLR

  Public
  Perl

  •

  MIT License

  •1•1•0•0•Updated Dec 17, 2018Dec 17, 2018

• nb_distribution

  Public
  novoBreak: local assembly for breakpoint detection in cancer genomes

  Perl

  •

  MIT License

  •6•1•0•0•Updated May 2, 2018May 2, 2018

• novobreak_src

  Public
  C

  •

  MIT License

  •1•0•1•0•Updated Sep 13, 2017Sep 13, 2017

• rainbow

  Public
  rb

  C

  •0•4•2•0•Updated Aug 16, 2017Aug 16, 2017