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Make vsc_kul_hasselt strict syntax compatible#1015

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nvnieuwk wants to merge 1 commit intonf-core:masterfrom
nvnieuwk:strict/vsc_kul_hasselt
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Make vsc_kul_hasselt strict syntax compatible#1015
nvnieuwk wants to merge 1 commit intonf-core:masterfrom
nvnieuwk:strict/vsc_kul_hasselt

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@nvnieuwk nvnieuwk commented Feb 18, 2026

This PR makes the config compatible with strict syntax.

@Joon-Klaps would you mind testing this out on the cluster? I'm not 100% sure the use of closures here is correct (even though it should work?)

You can run a quick test using the test profile of rnavar since that pipeline is strict syntax compatible.

NXF_VER=26.01.1-edge NXF_SYNTAX_PARSER=v2 nextflow run nf-core/rnavar -r dev -profile test -c <path-to-this-config>

Feel free to also test it with a pipeline you run without the strict syntax. To make sure that also still works.

@pontus pontus requested a review from Joon-Klaps March 13, 2026 06:36
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